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Cytarabine
Cytarabine ID: API-38822
CAS:147-94-4
Supplier:APIchem

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SMILES:O1C(n2ccc(nc2=O)N)C(O)C(O)C1CO	ChemMol.com
FORMULA: C9H13N3O5
MASS: 243.2166
EXACT MASS: 243.0855205
INTERATOMIC DISTANCES

              O   1      O   2      O   3      O   4      O   5      N   6
              ------------------------------------------------------------------
   O   1    0.0000 
   O   2    2.5875     0.0000 
   O   3    2.5876     2.1756     0.0000 
   O   4    2.0885     4.3154     3.1718     0.0000 
   O   5    2.9963     1.2790     3.4092     5.0068     0.0000 
   N   6    1.7820     2.1755     3.5201     3.8542     1.7320     0.0000 
   N   7    3.5129     2.9190     4.8529     5.5849     1.7320     1.7320 
   N   8    4.6586     4.6265     6.4403     6.5814     3.4641     3.0000 
   C   9    1.6180     1.0000     1.7819     3.3317     1.8366     1.7820 
   C  10    1.6180     1.7820     1.0000     2.6767     2.8219     2.5876 
   C  11    1.0000     1.7819     2.5876     3.0608     2.0000     1.0000 
   C  12    0.9999     2.5876     1.7820     1.7320     3.3804     2.5876 
   C  13    1.7819     3.5201     2.1756     1.0000     4.3771     3.5201 
   C  14    2.0886     3.1717     4.3154     3.9359     2.6457     1.0000 
   C  15    2.6767     1.9907     3.8542     4.7650     1.0000     1.0000 
   C  16    3.0883     3.8232     5.2267     4.8968     2.9999     1.7320 
   C  17    3.6779     3.7212     5.4573     5.6416     2.6457     2.0000 
   H  18    2.1026     0.9064     1.3312     3.5452     2.0833     2.3794 
   H  19    2.1025     1.3313     0.9063     3.2936     2.5192     2.6832 
   H  20    1.6153     1.3312     2.6833     3.6491     1.3812     0.9063 
   H  21    0.9063     3.0989     2.3794     1.2582     3.7487     2.6832 
   H  22    2.0508     3.2752     1.6411     1.5967     4.2686     3.6583 
   H  23    2.3985     4.0268     2.4210     1.0812     4.9495     4.1398 
   H  24    3.0316     0.6201     2.0050     4.5736     1.7627     2.7929 
   H  25    2.8490     2.7929     0.6200     2.9940     4.0155     4.0024 
   H  26    1.8744     3.4874     4.3267     3.4999     3.1408     1.4158 
   H  27    2.7084     4.8764     3.5568     0.6201     5.6113     4.4734 
   H  28    3.4493     4.4209     5.7277     5.0988     3.6200     2.2901 
   H  29    4.9053     5.1315     6.8532     6.7330     4.0130     3.3533 
   H  30    5.0794     4.7489     6.6806     7.0573     3.5191     3.3533 

              N   7      N   8      C   9      C  10      C  11      C  12
              ------------------------------------------------------------------
   N   7    0.0000 
   N   8    1.7320     0.0000 
   C   9    3.0883     4.6586     0.0000 
   C  10    4.0553     5.5613     0.9999     0.0000 
   C  11    2.6457     4.0000     1.0000     1.6180     0.0000 
   C  12    4.2636     5.5613     1.6180     1.0000     1.6180     0.0000 
   C  13    5.2267     6.4403     2.5876     1.7820     2.5876     1.0000 
   C  14    2.0000     2.6457     2.6767     3.3317     1.7320     3.0608 
   C  15    1.0000     2.6457     2.0886     3.0608     1.7320     3.3317 
   C  16    1.7320     1.7320     3.5129     4.2636     2.6457     4.0553 
   C  17    1.0000     1.0000     3.6779     4.5663     3.0000     4.5663 
   H  18    3.5468     5.1787     0.6200     0.9063     1.6153     1.8210 
   H  19    3.9495     5.5543     0.9063     0.6199     1.8210     1.6152 
   H  20    2.2406     3.7593     0.9064     1.8211     0.6200     2.1026 
   H  21    4.4104     5.5543     2.1026     1.6153     1.8210     0.6200 
   H  22    5.3067     6.6408     2.4337     1.4934     2.6728     1.0812 
   H  23    5.8437     7.0570     3.1347     2.2510     3.2016     1.5968 
   H  24    3.4691     5.1925     1.4158     1.9172     2.3266     2.8491 
   H  25    5.4143     6.9645     2.3266     1.4158     3.0316     1.9172 
   H  26    2.6200     3.1408     2.8379     3.3268     1.8397     2.8743 
   H  27    6.2035     7.1750     3.9055     3.1841     3.6771     2.2901 
   H  28    2.2901     1.8397     4.0544     4.7469     3.1408     4.4416 
   H  29    2.2901     0.6201     5.0794     5.9400     4.3433     5.8489 
   H  30    1.8397     0.6200     4.9054     5.8489     4.3433     5.9400 

              C  13      C  14      C  15      C  16      C  17      H  18
              ------------------------------------------------------------------
   C  13    0.0000 
   C  14    3.8542     0.0000 
   C  15    4.3154     1.7320     0.0000 
   C  16    4.8529     1.0000     2.0000     0.0000 
   C  17    5.4573     1.7320     1.7320     1.0000     0.0000 
   H  18    2.6832     3.2937     2.5548     4.1110     4.2150     0.0000 
   H  19    2.3793     3.5451     2.9521     4.4104     4.5790     0.4370 
   H  20    3.0989     1.8699     1.2582     2.6332     2.7741     1.4809 
   H  21    0.9063     2.9521     3.5452     3.9495     4.5790     2.3961 
   H  22    0.6200     4.1332     4.3499     5.1306     5.6446     2.3875 
   H  23    0.6200     4.4611     4.9256     5.4579     6.0756     3.1556 
   H  24    3.6991     3.7868     2.5782     4.4416     4.3098     1.0287 
   H  25    2.0051     4.7308     4.4143     5.6753     5.9729     1.9324 
   H  26    3.5518     0.6201     2.2901     1.4158     2.2901     3.4549 
   H  27    1.4158     4.5297     5.3846     5.4779     6.2443     4.0744 
   H  28    5.1674     1.4158     2.6200     0.6201     1.4158     4.6627 
   H  29    6.6805     2.8292     3.1408     1.8397     1.4158     5.6266 
   H  30    6.8532     3.1407     2.8292     2.2900     1.4158     5.3833 

              H  19      H  20      H  21      H  22      H  23      H  24
              ------------------------------------------------------------------
   H  19    0.0000 
   H  20    1.8120     0.0000 
   H  21    2.2247     2.3961     0.0000 
   H  22    2.0215     3.0967     1.3137     0.0000 
   H  23    2.8067     3.6990     1.5091     0.7970     0.0000 
   H  24    1.3374     1.9325     3.4161     3.3585     4.1437     0.0000 
   H  25    1.4982     3.2082     2.4419     1.3976     2.0945     2.6172 
   H  26    3.6405     2.1561     2.6478     3.9082     4.1363     4.0841 
   H  27    3.7902     4.2608     1.8651     1.9203     1.2046     5.0985 
   H  28    4.9401     3.1964     4.2617     5.4992     5.7556     5.0405 
   H  29    5.9836     4.1732     5.7805     6.9296     7.2896     5.7133 
   H  30    5.7805     4.0285     5.9836     7.0113     7.4727     5.2793 

              H  25      H  26      H  27      H  28      H  29      H  30
              ------------------------------------------------------------------
   H  25    0.0000 
   H  26    4.6750     0.0000 
   H  27    3.2868     4.0710     0.0000 
   H  28    6.1464     1.6200     5.6521     0.0000 
   H  29    7.3534     3.2380     7.3088     1.7320     0.0000 
   H  30    7.2304     3.6739     7.6599     2.4522     1.0739     0.0000 




ATOMIC CHARGES
   O   1   -0.3456191679
   O   2   -0.3846527060
   O   3   -0.3864220752
   O   4   -0.3923663991
   O   5   -0.2443610398
   N   6   -0.2699983354
   N   7   -0.1783355731
   N   8   -0.3429561839
   C   9    0.1285899628
   C  10    0.1135268048
   C  11    0.1679957990
   C  12    0.1125761545
   C  13    0.0729995206
   C  14    0.0152329946
   C  15    0.3521723903
   C  16   -0.0055871588
   C  17    0.1229789876
   H  18    0.0665389758
   H  19    0.0647374361
   H  20    0.0866824359
   H  21    0.0646521174
   H  22    0.0583699528
   H  23    0.0583699528
   H  24    0.2100867165
   H  25    0.2100046767
   H  26    0.0812279011
   H  27    0.2095080295
   H  28    0.0666295625
   H  29    0.1437091339
   H  30    0.1437091339


BOND ANGLES
  12    1   11   C3   O3   C3    108.001
   1   11   20   O3   C3   HC    171.002
  11    1   12   C3   O3   C3    108.001
   1   12   13   O3   C3   C3    125.999
   1   12   21   O3   C3   HC     62.999
  24    2    9   HO   O3   C3    119.995
   2    9   10   O3   C3   C3    126.006
   2    9   11   O3   C3   C3    125.993
   2    9   18   O3   C3   HC     63.006
   9    2   24   C3   O3   HO    119.995
  25    3   10   HO   O3   C3    119.997
   3   10   12   O3   C3   C3    126.001
   3   10   19   O3   C3   HC     63.001
  10    3   25   C3   O3   HO    119.997
  27    4   13   HO   O3   C3    120.006
   4   13   22   O3   C3   HC    159.996
   4   13   23   O3   C3   HC     79.999
  13    4   27   C3   O3   HO    120.006
  14    6   11  Car  Nar   C3    120.001
   6   11   20  Nar   C3   HC     62.997
  15    6   11  Car  Nar   C3    120.001
   6   11   20  Nar   C3   HC     62.997
  11    6   14   C3  Nar  Car    120.001
   6   14   16  Nar  Car  Car    120.001
   6   14   26  Nar  Car   HC    120.002
  15    6   14  Car  Nar  Car    119.999
   6   14   16  Nar  Car  Car    120.001
   6   14   26  Nar  Car   HC    120.002
  11    6   15   C3  Nar  Car    120.001
  14    6   15  Car  Nar  Car    119.999
  17    7   15  Car  Nar  Car    120.001
  15    7   17  Car  Nar  Car    120.001
  29    8   17   HC  Npl  Car    119.997
  30    8   17   HC  Npl  Car    120.002
  17    8   29  Car  Npl   HC    119.997
  30    8   29   HC  Npl   HC    120.001
  17    8   30  Car  Npl   HC    120.002
  29    8   30   HC  Npl   HC    120.001
  11    9   10   C3   C3   C3    108.001
   9   10   12   C3   C3   C3    108.000
   9   10   19   C3   C3   HC     62.998
  18    9   10   HC   C3   C3     63.000
   9   10   12   C3   C3   C3    108.000
   9   10   19   C3   C3   HC     62.998
  10    9   11   C3   C3   C3    108.001
   9   11   20   C3   C3   HC     63.004
  18    9   11   HC   C3   C3    171.001
   9   11   20   C3   C3   HC     63.004
  10    9   18   C3   C3   HC     63.000
  11    9   18   C3   C3   HC    171.001
  19   10   12   HC   C3   C3    170.998
  10   12   13   C3   C3   C3    126.001
  10   12   21   C3   C3   HC    171.000
  12   10   19   C3   C3   HC    170.998
  21   12   13   HC   C3   C3     62.999
  12   13   22   C3   C3   HC     80.002
  12   13   23   C3   C3   HC    159.999
  13   12   21   C3   C3   HC     62.999
  23   13   22   HC   C3   HC     79.997
  22   13   23   HC   C3   HC     79.997
  26   14   16   HC  Car  Car    119.997
  14   16   17  Car  Car  Car    120.001
  14   16   28  Car  Car   HC    119.997
  16   14   26  Car  Car   HC    119.997
  28   16   17   HC  Car  Car    120.002
  17   16   28  Car  Car   HC    120.002


TORSION ANGLES
  12    1   11    6    179.974
  12    1   11    9      0.026
  12    1   11   20      0.026
  11    1   12   10      0.026
  11    1   12   13    179.974
  11    1   12   21    179.974
  24    2    9   10      0.026
  24    2    9   11    179.974
  24    2    9   18      0.026
  25    3   10    9    179.974
  25    3   10   12      0.026
  25    3   10   19    179.974
  27    4   13   12    179.974
  27    4   13   22      0.026
  27    4   13   23      0.026
  14    6   11    1      0.026
  14    6   11    9    179.974
  14    6   11   20    179.974
  15    6   11    1    179.974
  15    6   11    9      0.026
  15    6   11   20      0.026
  11    6   14   16    179.974
  11    6   14   26      0.026
  15    6   14   16      0.026
  15    6   14   26    179.974
  11    6   15    5      0.026
  11    6   15    7    179.974
  14    6   15    5    179.974
  14    6   15    7      0.026
  17    7   15    5    179.974
  17    7   15    6      0.026
  15    7   17    8    179.974
  15    7   17   16      0.026
  29    8   17    7    179.974
  29    8   17   16      0.026
  30    8   17    7      0.026
  30    8   17   16    179.974
   2    9   10    3      0.026
   2    9   10   12    179.974
   2    9   10   19      0.026
  11    9   10    3    179.974
  11    9   10   12      0.026
  11    9   10   19    179.974
  18    9   10    3      0.026
  18    9   10   12    179.974
  18    9   10   19      0.026
   2    9   11    1    179.974
   2    9   11    6      0.026
   2    9   11   20      0.026
  10    9   11    1      0.026
  10    9   11    6    179.974
  10    9   11   20    179.974
  18    9   11    1      0.026
  18    9   11    6    179.974
  18    9   11   20    179.974
   3   10   12    1    179.974
   3   10   12   13      0.026
   3   10   12   21    179.974
   9   10   12    1      0.026
   9   10   12   13    179.974
   9   10   12   21      0.026
  19   10   12    1      0.026
  19   10   12   13    179.974
  19   10   12   21      0.026
   1   12   13    4      0.026
   1   12   13   22    179.974
   1   12   13   23    179.974
  10   12   13    4    179.974
  10   12   13   22      0.026
  10   12   13   23      0.026
  21   12   13    4      0.026
  21   12   13   22    179.974
  21   12   13   23    179.974
   6   14   16   17      0.026
   6   14   16   28    179.974
  26   14   16   17    179.974
  26   14   16   28      0.026
  14   16   17    7      0.026
  14   16   17    8    179.974
  28   16   17    7    179.974
  28   16   17    8      0.026


CHIRAL ATOMS
   C     9 is chiral: counterclockwise
   C    10 is chiral: counterclockwise
   C    11 is chiral: counterclockwise
   C    12 is chiral: counterclockwise